Based on the level set model and the reliability theory, a numerical approach of reliability-based topology optimization for compliant mechanisms with multiple inputs and outputs is presented. A multi-objective topology optimal model of compliant mechanisms considering uncertainties of the loads, material properties, and member geometries is developed. The reliability analysis and topology optimization are integrated in the optimal iterative process. The reliabilities of the compliant mechanisms are evaluated by using the first order reliability method. Meanwhile, the problem of structural topology optimization is solved by the level set method which is flexible in handling complex topological changes and concise in describing the boundary shape of the mechanism. Numerical examples show the importance of considering the stochastic nature of the compliant mechanisms in the topology optimization process.